How to integrate Flatfile MCP with Pydantic AI

This guide walks you through connecting Flatfile to Pydantic AI using the Composio tool router. By the end, you'll have a working Flatfile agent that can browse your spaces, view your workbooks, track import jobs, add records, and update records through natural language commands. This guide will help you understand how to give your Pydantic AI agent real control over a Flatfile account through Composio's Flatfile MCP server. Before we dive in, let's take a quick look at the key ideas and tools involved.

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Flatfile is a data exchange platform for collecting, validating, and transforming structured data. Use it to run cleaner imports and collaborative data onboarding workflows.

12 Tools

Introduction

This guide walks you through connecting Flatfile to Pydantic AI using the Composio tool router. By the end, you'll have a working Flatfile agent that can browse your spaces, view your workbooks, track import jobs, add records, and update records through natural language commands.

This guide will help you understand how to give your Pydantic AI agent real control over a Flatfile account through Composio's Flatfile MCP server.

Before we dive in, let's take a quick look at the key ideas and tools involved.

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TL;DR

Here's what you'll learn:
  • How to set up your Composio API key and User ID
  • How to create a Composio Tool Router session for Flatfile
  • How to attach an MCP Server to a Pydantic AI agent
  • How to stream responses and maintain chat history
  • How to build a simple REPL-style chat interface to test your Flatfile workflows

What is Pydantic AI?

Pydantic AI is a Python framework for building AI agents with strong typing and validation. It leverages Pydantic's data validation capabilities to create robust, type-safe AI applications.

Key features include:

  • Type Safety: Built on Pydantic for automatic data validation
  • MCP Support: Native support for Model Context Protocol servers
  • Streaming: Built-in support for streaming responses
  • Async First: Designed for async/await patterns

What is the Flatfile MCP server, and what's possible with it?

The Flatfile MCP server is an implementation of the Model Context Protocol that connects your AI agent and assistants like Claude, Cursor, etc directly to your Flatfile account. It provides structured and secure access to your environments, spaces, workbooks, sheets, records, files, and jobs, so your agent can discover data workspaces, inspect sheets, read and edit records, track files, and monitor jobs on your behalf.

  • Workspace and workbook discovery: Have your agent find environments, search spaces, and list workbooks with their sheets before starting a data task.
  • Sheet inspection and record retrieval: Let the agent inspect sheet fields and record counts, then read records based on validity, field values, or search terms.
  • Record creation and updates: Direct your agent to add rows to a sheet or update existing records with corrected and transformed values.
  • Record cleanup: Instruct your agent to permanently delete selected records from a Flatfile sheet when they are no longer needed.
  • File and job monitoring: Have your agent list import or export files, check their processing status, and review job progress, results, and diagnostic details.

What is the Composio tool router, and how does it fit here?

What is Composio SDK?

Composio's Composio SDK helps agents find the right tools for a task at runtime. You can plug in multiple toolkits (like Gmail, HubSpot, and GitHub), and the agent will identify the relevant app and action to complete multi-step workflows. This can reduce token usage and improve the reliability of tool calls. Read more here: Getting started with Composio SDK

The tool router generates a secure MCP URL that your agents can access to perform actions.

How the Composio SDK works

The Composio SDK follows a three-phase workflow:

  1. Discovery: Searches for tools matching your task and returns relevant toolkits with their details.
  2. Authentication: Checks for active connections. If missing, creates an auth config and returns a connection URL via Auth Link.
  3. Execution: Executes the action using the authenticated connection.

Step-by-step Guide

Step by step09 STEPS
1

Prerequisites

Before starting, make sure you have:
  • Python 3.9 or higher
  • A Composio account with an active API key
  • Basic familiarity with Python and async programming
2

Getting API Keys for OpenAI and Composio

OpenAI API Key
  • Go to the OpenAI dashboard and create an API key. You'll need credits to use the models, or you can connect to another model provider.
  • Keep the API key safe.
Composio API Key
  • Log in to the Composio dashboard.
  • Navigate to your API settings and generate a new API key.
  • Store this key securely as you'll need it for authentication.
3

Install dependencies

bash
pip install composio pydantic-ai python-dotenv

Install the required libraries.

What's happening:

  • composio connects your agent to external SaaS tools like Flatfile
  • pydantic-ai lets you create structured AI agents with tool support
  • python-dotenv loads your environment variables securely from a .env file
4

Set up environment variables

bash
COMPOSIO_API_KEY=your_composio_api_key_here
USER_ID=your_user_id_here
OPENAI_API_KEY=your_openai_api_key

Create a .env file in your project root.

What's happening:

  • COMPOSIO_API_KEY authenticates your agent to Composio's API
  • USER_ID associates your session with your account for secure tool access
  • OPENAI_API_KEY to access OpenAI LLMs
5

Import dependencies

python
import asyncio
import os
from dotenv import load_dotenv
from composio import Composio
from pydantic_ai import Agent
from pydantic_ai.mcp import MCPServerStreamableHTTP

load_dotenv()
What's happening:
  • We load environment variables and import required modules
  • Composio manages connections to Flatfile
  • MCPServerStreamableHTTP connects to the Flatfile MCP server endpoint
  • Agent from Pydantic AI lets you define and run the AI assistant
6

Create a Tool Router Session

python
async def main():
    api_key = os.getenv("COMPOSIO_API_KEY")
    user_id = os.getenv("USER_ID")
    if not api_key or not user_id:
        raise RuntimeError("Set COMPOSIO_API_KEY and USER_ID in your environment")

    # Create a Composio Tool Router session for Flatfile
    composio = Composio(api_key=api_key)
    session = composio.create(
        user_id=user_id,
        toolkits=["flatfile"],
    )
    url = session.mcp.url
    if not url:
        raise ValueError("Composio session did not return an MCP URL")
What's happening:
  • We're creating a Tool Router session that gives your agent access to Flatfile tools
  • The create method takes the user ID and specifies which toolkits should be available
  • The returned session.mcp.url is the MCP server URL that your agent will use
7

Initialize the Pydantic AI Agent

python
# Attach the MCP server to a Pydantic AI Agent
flatfile_mcp = MCPServerStreamableHTTP(url, headers={"x-api-key": COMPOSIO_API_KEY})
agent = Agent(
    "openai:gpt-5",
    toolsets=[flatfile_mcp],
    instructions=(
        "You are a Flatfile assistant. Use Flatfile tools to help users "
        "with their requests. Ask clarifying questions when needed."
    ),
)
What's happening:
  • The MCP client connects to the Flatfile endpoint
  • The agent uses GPT-5 to interpret user commands and perform Flatfile operations
  • The instructions field defines the agent's role and behavior
8

Build the chat interface

python
# Simple REPL with message history
history = []
print("Chat started! Type 'exit' or 'quit' to end.\n")
print("Try asking the agent to help you with Flatfile.\n")

while True:
    user_input = input("You: ").strip()
    if user_input.lower() in {"exit", "quit", "bye"}:
        print("\nGoodbye!")
        break
    if not user_input:
        continue

    print("\nAgent is thinking...\n", flush=True)

    async with agent.run_stream(user_input, message_history=history) as stream_result:
        collected_text = ""
        async for chunk in stream_result.stream_output():
            text_piece = None
            if isinstance(chunk, str):
                text_piece = chunk
            elif hasattr(chunk, "delta") and isinstance(chunk.delta, str):
                text_piece = chunk.delta
            elif hasattr(chunk, "text"):
                text_piece = chunk.text
            if text_piece:
                collected_text += text_piece
        result = stream_result

    print(f"Agent: {collected_text}\n")
    history = result.all_messages()
What's happening:
  • The agent reads input from the terminal and streams its response
  • Flatfile API calls happen automatically under the hood
  • The model keeps conversation history to maintain context across turns
9

Run the application

python
if __name__ == "__main__":
    asyncio.run(main())
What's happening:
  • The asyncio loop launches the agent and keeps it running until you exit

Complete Code

Here's the complete code to get you started with Flatfile and Pydantic AI:

python
import asyncio
import os
from dotenv import load_dotenv
from composio import Composio
from pydantic_ai import Agent
from pydantic_ai.mcp import MCPServerStreamableHTTP

load_dotenv()

async def main():
    api_key = os.getenv("COMPOSIO_API_KEY")
    user_id = os.getenv("USER_ID")
    if not api_key or not user_id:
        raise RuntimeError("Set COMPOSIO_API_KEY and USER_ID in your environment")

    # Create a Composio Tool Router session for Flatfile
    composio = Composio(api_key=api_key)
    session = composio.create(
        user_id=user_id,
        toolkits=["flatfile"],
    )
    url = session.mcp.url
    if not url:
        raise ValueError("Composio session did not return an MCP URL")

    # Attach the MCP server to a Pydantic AI Agent
    flatfile_mcp = MCPServerStreamableHTTP(url, headers={"x-api-key": COMPOSIO_API_KEY})
    agent = Agent(
        "openai:gpt-5",
        toolsets=[flatfile_mcp],
        instructions=(
            "You are a Flatfile assistant. Use Flatfile tools to help users "
            "with their requests. Ask clarifying questions when needed."
        ),
    )

    # Simple REPL with message history
    history = []
    print("Chat started! Type 'exit' or 'quit' to end.\n")
    print("Try asking the agent to help you with Flatfile.\n")

    while True:
        user_input = input("You: ").strip()
        if user_input.lower() in {"exit", "quit", "bye"}:
            print("\nGoodbye!")
            break
        if not user_input:
            continue

        print("\nAgent is thinking...\n", flush=True)

        async with agent.run_stream(user_input, message_history=history) as stream_result:
            collected_text = ""
            async for chunk in stream_result.stream_output():
                text_piece = None
                if isinstance(chunk, str):
                    text_piece = chunk
                elif hasattr(chunk, "delta") and isinstance(chunk.delta, str):
                    text_piece = chunk.delta
                elif hasattr(chunk, "text"):
                    text_piece = chunk.text
                if text_piece:
                    collected_text += text_piece
            result = stream_result

        print(f"Agent: {collected_text}\n")
        history = result.all_messages()

if __name__ == "__main__":
    asyncio.run(main())

Conclusion

You've built a Pydantic AI agent that can interact with Flatfile through Composio's Tool Router. With this setup, your agent can perform real Flatfile actions through natural language. You can extend this further by:
  • Adding other toolkits like Gmail, HubSpot, or Salesforce
  • Building a web-based chat interface around this agent
  • Using multiple MCP endpoints to enable cross-app workflows (for example, Gmail + Flatfile for workflow automation)
This architecture makes your AI agent "agent-native", able to securely use APIs in a unified, composable way without custom integrations.
TOOLS

Supported Tools

Every Flatfile action and event your agent gets out of the box.

Delete Records

Permanently delete one to 100 explicitly identified records from one Flatfile sheet.

Get Job

Get detailed status, outcome, result, and diagnostic information for one Flatfile asynchronous job.

Get Sheet

Get one sheet's field configuration and record counts before reading or writing records.

Get Space

Get safe metadata for one Flatfile space without exposing transient access credentials or token-bearing guest links.

Insert Records

Insert one or more rows into a Flatfile sheet using simple field-key to value objects.

List Environments

List Flatfile environments visible to the connected environment secret key and return the IDs needed to find spaces.

List Files

Discover import or export files and their processing status, optionally within a Flatfile space.

List Jobs

Find asynchronous Flatfile jobs by environment, space, workbook, file, or parent job and inspect progress at a glance.

List Records

Read one page of records from a Flatfile sheet, optionally filtering by validity, field, record ID, search value, or FFQL expression.

List Spaces

Find Flatfile spaces by environment, text, namespace, archive state, or template status.

List Workbooks

List workbooks, optionally within a space, with their nested sheets so an agent can continue to sheet and record tasks.

Update Records

Update one or more existing Flatfile records by ID using simple field-key to value objects.

FAQ

Frequently asked questions

With a standalone Flatfile MCP server, the agents and LLMs can only access a fixed set of Flatfile tools tied to that server. However, with the Composio Tool Router, agents can dynamically load tools from Flatfile and many other apps based on the task at hand, all through a single MCP endpoint.

Yes, you can. Pydantic AI fully supports MCP integration. You get structured tool calling, message history handling, and model orchestration while Tool Router takes care of discovering and serving the right Flatfile tools.

Yes, absolutely. You can configure which Flatfile scopes and actions are allowed when connecting your account to Composio. You can also bring your own OAuth credentials or API configuration so you keep full control over what the agent can do.

All sensitive data such as tokens, keys, and configuration is fully encrypted at rest and in transit. Composio is SOC 2 Type 2 compliant and follows strict security practices so your Flatfile data and credentials are handled as safely as possible.

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