How to integrate DocuPipe MCP with Autogen

This guide walks you through connecting DocuPipe to AutoGen using the Composio tool router. By the end, you'll have a working DocuPipe agent that can parse invoices and extract payment fields, classify contracts by risk level, export reviewed documents as structured json through natural language commands. This guide will help you understand how to give your AutoGen agent real control over a DocuPipe account through Composio's DocuPipe MCP server. Before we dive in, let's take a quick look at the key ideas and tools involved.

DocuPipe logoDocuPipe
Api Key

DocuPipe is a document automation API for parsing, classifying, reviewing, and exporting structured data. Use it to turn messy PDFs and files into clean data your workflows can trust.

13 Tools

Introduction

This guide walks you through connecting DocuPipe to AutoGen using the Composio tool router. By the end, you'll have a working DocuPipe agent that can parse invoices and extract payment fields, classify contracts by risk level, export reviewed documents as structured json through natural language commands.

This guide will help you understand how to give your AutoGen agent real control over a DocuPipe account through Composio's DocuPipe MCP server.

Before we dive in, let's take a quick look at the key ideas and tools involved.

Also integrate DocuPipe with

TL;DR

Here's what you'll learn:
  • Get and set up your OpenAI and Composio API keys
  • Install the required dependencies for Autogen and Composio
  • Initialize Composio and create a Tool Router session for DocuPipe
  • Wire that MCP URL into Autogen using McpWorkbench and StreamableHttpServerParams
  • Configure an Autogen AssistantAgent that can call DocuPipe tools
  • Run a live chat loop where you ask the agent to perform DocuPipe operations

What is AutoGen?

Autogen is a framework for building multi-agent conversational AI systems from Microsoft. It enables you to create agents that can collaborate, use tools, and maintain complex workflows.

Key features include:

  • Multi-Agent Systems: Build collaborative agent workflows
  • MCP Workbench: Native support for Model Context Protocol tools
  • Streaming HTTP: Connect to external services through streamable HTTP
  • AssistantAgent: Pre-built agent class for tool-using assistants

What is the DocuPipe MCP server, and what's possible with it?

The DocuPipe MCP server is an implementation of the Model Context Protocol that connects your AI agent and assistants like Claude, Cursor, etc directly to your DocuPipe account. It provides structured and secure access to your documents, extraction schemas, processing jobs, and usage data, so your agent can upload and parse documents, extract structured information, track processing, find records, and manage files on your behalf.

  • Document upload and parsing: Have your agent submit a local file or remote file for parsing, then retrieve its processed content, page count, metadata, and file details.
  • Structured data extraction: Direct your agent to start structured extraction on a processed document and retrieve the completed results with field details.
  • Reusable extraction schemas: Let the agent create extraction schemas with custom guidelines, inspect existing schemas, and list the schemas available in your workspace.
  • Document and job tracking: Instruct your agent to find documents by dataset, creation time, filename, or search terms, and check the progress of processing jobs.
  • Workspace management and usage: Have your agent review plan and credit usage, inspect job activity, and permanently delete one or several documents when they are no longer needed.

What is the Composio tool router, and how does it fit here?

What is Composio SDK?

Composio's Composio SDK helps agents find the right tools for a task at runtime. You can plug in multiple toolkits (like Gmail, HubSpot, and GitHub), and the agent will identify the relevant app and action to complete multi-step workflows. This can reduce token usage and improve the reliability of tool calls. Read more here: Getting started with Composio SDK

The tool router generates a secure MCP URL that your agents can access to perform actions.

How the Composio SDK works

The Composio SDK follows a three-phase workflow:

  1. Discovery: Searches for tools matching your task and returns relevant toolkits with their details.
  2. Authentication: Checks for active connections. If missing, creates an auth config and returns a connection URL via Auth Link.
  3. Execution: Executes the action using the authenticated connection.

Step-by-step Guide

Step by step08 STEPS
1

Prerequisites

You will need:

  • A Composio API key
  • An OpenAI API key (used by Autogen's OpenAIChatCompletionClient)
  • A DocuPipe account you can connect to Composio
  • Some basic familiarity with Autogen and Python async
2

Getting API Keys for OpenAI and Composio

OpenAI API Key
  • Go to the OpenAI dashboard and create an API key. You'll need credits to use the models, or you can connect to another model provider.
  • Keep the API key safe.
Composio API Key
  • Log in to the Composio dashboard.
  • Navigate to your API settings and generate a new API key.
  • Store this key securely as you'll need it for authentication.
3

Install dependencies

bash
pip install composio python-dotenv
pip install autogen-agentchat autogen-ext-openai autogen-ext-tools

Install Composio, Autogen extensions, and dotenv.

What's happening:

  • composio connects your agent to DocuPipe via MCP
  • autogen-agentchat provides the AssistantAgent class
  • autogen-ext-openai provides the OpenAI model client
  • autogen-ext-tools provides MCP workbench support

4

Set up environment variables

bash
COMPOSIO_API_KEY=your-composio-api-key
OPENAI_API_KEY=your-openai-api-key
USER_ID=your-user-identifier@example.com

Create a .env file in your project folder.

What's happening:

  • COMPOSIO_API_KEY is required to talk to Composio
  • OPENAI_API_KEY is used by Autogen's OpenAI client
  • USER_ID is how Composio identifies which user's DocuPipe connections to use
5

Import dependencies and create Tool Router session

python
import asyncio
import os
from dotenv import load_dotenv
from composio import Composio

from autogen_agentchat.agents import AssistantAgent
from autogen_ext.models.openai import OpenAIChatCompletionClient
from autogen_ext.tools.mcp import McpWorkbench, StreamableHttpServerParams

load_dotenv()

async def main():
    # Initialize Composio and create a DocuPipe session
    composio = Composio(api_key=os.getenv("COMPOSIO_API_KEY"))
    session = composio.create(
        user_id=os.getenv("USER_ID"),
        toolkits=["docupipe"]
    )
    url = session.mcp.url
What's happening:
  • load_dotenv() reads your .env file
  • Composio(api_key=...) initializes the SDK
  • create(...) creates a Tool Router session that exposes DocuPipe tools
  • session.mcp.url is the MCP endpoint that Autogen will connect to
6

Configure MCP parameters for Autogen

python
# Configure MCP server parameters for Streamable HTTP
server_params = StreamableHttpServerParams(
    url=url,
    timeout=30.0,
    sse_read_timeout=300.0,
    terminate_on_close=True,
    headers={"x-api-key": os.getenv("COMPOSIO_API_KEY")}
)

Autogen expects parameters describing how to talk to the MCP server. That is what StreamableHttpServerParams is for.

What's happening:

  • url points to the Tool Router MCP endpoint from Composio
  • timeout is the HTTP timeout for requests
  • sse_read_timeout controls how long to wait when streaming responses
  • terminate_on_close=True cleans up the MCP server process when the workbench is closed
7

Create the model client and agent

python
# Create model client
model_client = OpenAIChatCompletionClient(
    model="gpt-5",
    api_key=os.getenv("OPENAI_API_KEY")
)

# Use McpWorkbench as context manager
async with McpWorkbench(server_params) as workbench:
    # Create DocuPipe assistant agent with MCP tools
    agent = AssistantAgent(
        name="docupipe_assistant",
        description="An AI assistant that helps with DocuPipe operations.",
        model_client=model_client,
        workbench=workbench,
        model_client_stream=True,
        max_tool_iterations=10
    )

What's happening:

  • OpenAIChatCompletionClient wraps the OpenAI model for Autogen
  • McpWorkbench connects the agent to the MCP tools
  • AssistantAgent is configured with the DocuPipe tools from the workbench
8

Run the interactive chat loop

python
print("Chat started! Type 'exit' or 'quit' to end the conversation.\n")
print("Ask any DocuPipe related question or task to the agent.\n")

# Conversation loop
while True:
    user_input = input("You: ").strip()

    if user_input.lower() in ["exit", "quit", "bye"]:
        print("\nGoodbye!")
        break

    if not user_input:
        continue

    print("\nAgent is thinking...\n")

    # Run the agent with streaming
    try:
        response_text = ""
        async for message in agent.run_stream(task=user_input):
            if hasattr(message, "content") and message.content:
                response_text = message.content

        # Print the final response
        if response_text:
            print(f"Agent: {response_text}\n")
        else:
            print("Agent: I encountered an issue processing your request.\n")

    except Exception as e:
        print(f"Agent: Sorry, I encountered an error: {str(e)}\n")
What's happening:
  • The script prompts you in a loop with You:
  • Autogen passes your input to the model, which decides which DocuPipe tools to call via MCP
  • agent.run_stream(...) yields streaming messages as the agent thinks and calls tools
  • Typing exit, quit, or bye ends the loop

Complete Code

Here's the complete code to get you started with DocuPipe and AutoGen:

python
import asyncio
import os
from dotenv import load_dotenv
from composio import Composio

from autogen_agentchat.agents import AssistantAgent
from autogen_ext.models.openai import OpenAIChatCompletionClient
from autogen_ext.tools.mcp import McpWorkbench, StreamableHttpServerParams

load_dotenv()

async def main():
    # Initialize Composio and create a DocuPipe session
    composio = Composio(api_key=os.getenv("COMPOSIO_API_KEY"))
    session = composio.create(
        user_id=os.getenv("USER_ID"),
        toolkits=["docupipe"]
    )
    url = session.mcp.url

    # Configure MCP server parameters for Streamable HTTP
    server_params = StreamableHttpServerParams(
        url=url,
        timeout=30.0,
        sse_read_timeout=300.0,
        terminate_on_close=True,
        headers={"x-api-key": os.getenv("COMPOSIO_API_KEY")}
    )

    # Create model client
    model_client = OpenAIChatCompletionClient(
        model="gpt-5",
        api_key=os.getenv("OPENAI_API_KEY")
    )

    # Use McpWorkbench as context manager
    async with McpWorkbench(server_params) as workbench:
        # Create DocuPipe assistant agent with MCP tools
        agent = AssistantAgent(
            name="docupipe_assistant",
            description="An AI assistant that helps with DocuPipe operations.",
            model_client=model_client,
            workbench=workbench,
            model_client_stream=True,
            max_tool_iterations=10
        )

        print("Chat started! Type 'exit' or 'quit' to end the conversation.\n")
        print("Ask any DocuPipe related question or task to the agent.\n")

        # Conversation loop
        while True:
            user_input = input("You: ").strip()

            if user_input.lower() in ['exit', 'quit', 'bye']:
                print("\nGoodbye!")
                break

            if not user_input:
                continue

            print("\nAgent is thinking...\n")

            # Run the agent with streaming
            try:
                response_text = ""
                async for message in agent.run_stream(task=user_input):
                    if hasattr(message, 'content') and message.content:
                        response_text = message.content

                # Print the final response
                if response_text:
                    print(f"Agent: {response_text}\n")
                else:
                    print("Agent: I encountered an issue processing your request.\n")

            except Exception as e:
                print(f"Agent: Sorry, I encountered an error: {str(e)}\n")

if __name__ == "__main__":
    asyncio.run(main())

Conclusion

You now have an Autogen assistant wired into DocuPipe through Composio's Tool Router and MCP. From here you can:
  • Add more toolkits to the toolkits list, for example notion or hubspot
  • Refine the agent description to point it at specific workflows
  • Wrap this script behind a UI, Slack bot, or internal tool
Once the pattern is clear for DocuPipe, you can reuse the same structure for other MCP-enabled apps with minimal code changes.
TOOLS

Supported Tools

Every DocuPipe action and event your agent gets out of the box.

Create Schema

Create a reusable extraction schema from a valid JSON Schema and optional extraction guidelines.

Delete Document

Permanently delete one previously submitted DocuPipe document by ID.

Delete Documents

Permanently delete multiple previously submitted DocuPipe documents by ID in one batch.

Find Documents

Browse documents by dataset and creation time, or search filenames and document IDs when query is provided.

Find Jobs

Retrieve one asynchronous job by ID, or list and filter jobs when job_id is omitted.

Get Account Usage

Return current plan and credit state together with job counts and credits consumed by job type, optionally including daily usage.

Get Document

Retrieve a processed document, including processing state, parsed content, page count, metadata, and file details.

Get Schema

Retrieve one extraction schema and its full JSON Schema definition by ID.

Get Standardization

Retrieve one completed standardization as structured JSON, including extraction data and field metadata.

List Schemas

List extraction schemas available to the connected workspace, optionally including each full JSON Schema payload.

List Standardizations

List structured extraction results, filtered by schema, document, or up to 1000 known standardization IDs.

Standardize Document

Start V3 agentic structured extraction for one processed document and return the job and standardization IDs.

Upload Document

Submit one local file or remote file URL for asynchronous parsing.

FAQ

Frequently asked questions

With a standalone DocuPipe MCP server, the agents and LLMs can only access a fixed set of DocuPipe tools tied to that server. However, with the Composio Tool Router, agents can dynamically load tools from DocuPipe and many other apps based on the task at hand, all through a single MCP endpoint.

Yes, you can. Autogen fully supports MCP integration. You get structured tool calling, message history handling, and model orchestration while Tool Router takes care of discovering and serving the right DocuPipe tools.

Yes, absolutely. You can configure which DocuPipe scopes and actions are allowed when connecting your account to Composio. You can also bring your own OAuth credentials or API configuration so you keep full control over what the agent can do.

All sensitive data such as tokens, keys, and configuration is fully encrypted at rest and in transit. Composio is SOC 2 Type 2 compliant and follows strict security practices so your DocuPipe data and credentials are handled as safely as possible.

Start with DocuPipe.It takes 30 seconds.

Managed auth, hosted MCP servers, and every DocuPipe tool your agent needs.Free to start.

Start building